BBT062

Biomarker & Diagnostics

L-T-P3-0-0 Credits3 Session2024-25 TypeTheory
Appears in 1 semester

B.Tech Biotechnology · Sem 6 (Departmental Elective-III)

Pre-requisites: Basic Knowledge of

Syllabus

5 units · 46 lecture hours
Unit1

Unit 1: Introduction to Molecular Diagnostics

12 hrs

History of diagnostics, Age of molecular diagnostics, Significance, Scope, Rise of diagnostic industry in Indian and global scenario, Cellular Complexity: Cell components, Cell Differentiation, Cellular communication – endocrine signaling, paracrine signaling and autocrine signaling, contact dependent and synaptic communications, Intracellular networks – transport pathways, signaling pathways and metabolic networks. Eukaryotic Cell Control System and their Components, Intracellular cell cycle control system, Extracellular Cell Cycle Control System, Regulation of Cell Growth and Apoptosis, Genetic and epigenetic factors that regulate these pathways, their abnormalities that alter the pathways and cellular functions.

Unit2

Unit 2: Molecular Oncology Mitochondrial disorders

8 hrs

Cancer – Benign and Malignant neoplasms, multifactorial disposition, Cancer pathogenesis, positive and negative mediators of neoplastic development, Proto-oncogenes, Oncogenes and Tumor suppressors. Allele loss and loss of Heterozygosity. Mitochondrial inheritance, Mitochondrial myopathy, lactic acidosis, MELAS, LHONs, identity testing

Unit3

Unit 3: Biomarkers in disease diagnostics

6 hrs

FDA definition of disease markers, Role of markers in Disease diagnosis. Approaches and methods in the identification of disease markers, predictive value, diagnostic value, emerging blood markers for sepsis, tumor & cancer markers, markers in inflammation and diagnosis of cytoskeletal disorders

Unit4

Unit 4: Chromosomes, Human disorders, and Cytogenetic analysis

10 hrs

Structure, types and organization; Chromosome organization, Euchromatin and heterochromatin and Histone modifications. Chromosome banding and nomenclature; Nomenclature and functional significances of chromosome bands. GC and AT rich isochores. Structural and Numerical aberrations and its consequences. X-chromosome dosage compensation and inactivation mechanism. Sex determination and Y chromosome; function, and diseases. Uniparentaldisomy, Genomic Imprinting and disorders. FISH, CGH, Flow cytometry techniques and clinical diagnostics.

Unit5

Unit 5: Genomic instability, Chromosome mapping & Genome plasticity

10 hrs

Common fragile sites and methods of induction, Heritable fragile sites and FXS. Genomic Instability, mechanism and diseases. Trinucleotide Repeats; Mechanism of expansion and triplet repeats and related disorders. Genetic linkage maps, Relation to the probability of recombination, Pedigree analysis with genetic markers and overview of human genome project B.Tech. (Biotechnology) 3rd Year Dr. A.P.J. Abdul Kalam Technical University Uttar Pradesh, Lucknow

Course Objectives5 points
  • To introduce basics of molecular diagnostics, its scope and applications
  • To learn various pathways of cell signaling, eukaryotic cell control system and their components
  • To learn different molecular mechanisms of generation of metabolic disorders
  • To elaborate various applications of biomarkers in disease diagnostics
  • To understand advanced molecular techniques: FISH, CGH, flow cytometry, genome mapping methodology
Course Outcomes (COs)6 outcomes

After completion of the course student will be able to:

  1. CO1Understand the history and basics of Molecular Diagnostics.
  2. CO2Understand importance of biomarkers in molecular diagnostics
  3. CO3Understand molecular oncology with specific emphasis on cancer and its relevant cause
  4. CO4Learn principles and applications of some of advanced molecular diagnostic techniques
  5. CO5Learn about the different types of molecular markers, their role in diagnostics.
  6. CO6Understand the basics of chromosome related disorders, techniques like FISH, cytometry and others used in diagnostics.

Reference Book

  1. S. No.

Books

  1. Year of Publication/ Reprint
  2. Molecular biology of the cell. Bruce Alberts, 6th Edition 2014
  3. Principles of Tissue Engineering. Robert Lanza. Elsevier Publications 2000
  4. Introduction to Tissue Engineering, Applications and Challenges. Ravi Birla. Wiley Publications 2014
  5. Molecular Cell Biology: Darnell J, Lodish H and Baltimore D 1990
  6. Cell and Molecular Biology: De Robertis EDP and De Robertis EMF 1980
  7. An Introduction to Human Molecular Genetics by Pasternak et al., John Wiley & Sons 2005
  8. Human Chromosomes by Miller & Tharman, Springer Publishing Company 2001
  9. Molecular Biology of the Cell by Alberts et al., Garland Press 2008 B.Tech. (Biotechnology) 3rd Year Dr. A.P.J. Abdul Kalam Technical University Uttar Pradesh, Lucknow
  10. Genes IX, by Lewin B, Pearson India 2007
  11. Cell and Molecular Biology by De Robertis and De Robertis, Lipincott & Wilkins 2007
  12. Genome III by TA Brown, Garland Press 2006
  13. Elements of Medical Genetics by Turnpenny and Ellard, Churchill Livingstone 1995
  14. Animal Cell Culture: Ian Freshney 2015 COURSE DETAILS: BIOMARKER & DIAGNOSTICS

Official AKTU syllabus

This subject is on page 43, 44, 45 of the original AKTU PDF.

Official AKTU syllabus PDF ↗